α-synuclein aggregate Antibody [C4F17]

Application: Reactivity:Mouse, Rat, Human

Usage Information

Dilution
IHC1:2000 IF1:5000

Application
IHC, IF

Reactivity
Mouse, Rat, Human

Source
Rabbit Monoclonal Antibody

Storage Buffer
PBS, pH 7.2+50% Glycerol+0.05% BSA+0.01% NaN3

Storage (from the date of receipt)
-20°C (avoid freeze-thaw cycles), 2 years

Positive Control	Mouse colon tissue; Rat dorsal root ganglian (DRG) tissue; Human DLB brain tissue; ReNcell VM cells
Negative Control

Experimental Methods

IF
Experimental Protocol: Sample Preparation 1. Adherent Cells: Place a clean, sterile coverslip in a culture dish. Once the cells grow to near confluence as a monolayer, remove the coverslip for further use. 2. Suspension Cells: Seed the cells onto a clean, sterile slide coated with poly-L-lysine. 3. Frozen Sections: Allow the slide to thaw at room temperature. Wash it with pure water or PBS for 2 times, 3 minutes each time. 4. Paraffin Sections: Deparaffinization and rehydration. Wash the slide with pure water or PBS for 3 times, 3 minutes each time. Then perform antigen retrieval. Fixation 1. Fix the cell coverslips/spots or tissue sections at room temperature using a fixative such as 4% paraformaldehyde (4% PFA) for 10-15 minutes. 2. Wash the sample with PBS for 3 times, 3 minutes each time. Permeabilization 1.Add a detergent such as 0.1–0.3% Triton X-100 to the sample and incubate at room temperature for 10–20 minutes. (Note: This step is only required for intracellular antigens. For antigens expressed on the cell membrane, this step is unnecessary.) Wash the sample with PBS for 3 times, 3 minutes each time. Blocking Add blocking solution and incubate at room temperature for at least 1 hour. (Common blocking solutions include: serum from the same source as the secondary antibody, BSA, or goat serum.) Note: Ensure the sample remains moist during and after the blocking step to prevent drying, which can lead to high background. Immunofluorescence Staining (Day 1) 1. Remove the blocking solution and add the diluted primary antibody. 2. Incubate the sample in a humidified chamber at 4°C overnight. Immunofluorescence Staining (Day 2) 1. Remove the primary antibody and wash with PBST for 3 times, 5 minutes each time. 2. Add the diluted fluorescent secondary antibody and incubate in the dark at 4°C for 1–2 hours. 3. Remove the secondary antibody and wash with PBST for 3 times, 5 minutes each time. 4. Add diluted DAPI and incubate at room temperature in the dark for 5–10 minutes. 5. Wash with PBST for 3 times, 5 minutes each time. Mounting 1. Mount the sample with an anti-fade mounting medium. 2. Allow the slide to dry at room temperature overnight in the dark. 3. Store the slide in a slide storage box at 4°C, protected from light.

IF

Experimental Protocol:

Sample Preparation

1. Adherent Cells: Place a clean, sterile coverslip in a culture dish. Once the cells grow to near confluence as a monolayer, remove the coverslip for further use.

2. Suspension Cells: Seed the cells onto a clean, sterile slide coated with poly-L-lysine.

3. Frozen Sections: Allow the slide to thaw at room temperature. Wash it with pure water or PBS for 2 times, 3 minutes each time.

4. Paraffin Sections: Deparaffinization and rehydration. Wash the slide with pure water or PBS for 3 times, 3 minutes each time. Then perform antigen retrieval.

Fixation

1. Fix the cell coverslips/spots or tissue sections at room temperature using a fixative such as 4% paraformaldehyde (4% PFA) for 10-15 minutes.

2. Wash the sample with PBS for 3 times, 3 minutes each time.

Permeabilization

1.Add a detergent such as 0.1–0.3% Triton X-100 to the sample and incubate at room temperature for 10–20 minutes.

(Note: This step is only required for intracellular antigens. For antigens expressed on the cell membrane, this step is unnecessary.)

Wash the sample with PBS for 3 times, 3 minutes each time.

Blocking

Add blocking solution and incubate at room temperature for at least 1 hour. (Common blocking solutions include: serum from the same source as the secondary antibody, BSA, or goat serum.)

Note: Ensure the sample remains moist during and after the blocking step to prevent drying, which can lead to high background.

Immunofluorescence Staining (Day 1)

1. Remove the blocking solution and add the diluted primary antibody.

2. Incubate the sample in a humidified chamber at 4°C overnight.

Immunofluorescence Staining (Day 2)

1. Remove the primary antibody and wash with PBST for 3 times, 5 minutes each time.

2. Add the diluted fluorescent secondary antibody and incubate in the dark at 4°C for 1–2 hours.

3. Remove the secondary antibody and wash with PBST for 3 times, 5 minutes each time.

4. Add diluted DAPI and incubate at room temperature in the dark for 5–10 minutes.

5. Wash with PBST for 3 times, 5 minutes each time.

Mounting

1. Mount the sample with an anti-fade mounting medium.

2. Allow the slide to dry at room temperature overnight in the dark.

3. Store the slide in a slide storage box at 4°C, protected from light.

IHC
Experimental Protocol： Deparaffinization/Rehydration 1. Deparaffinize/hydrate sections: 2. Incubate sections in three washes of xylene for 5 min each. 3. Incubate sections in two washes of 100% ethanol for 10 min each. 4. Incubate sections in two washes of 95% ethanol for 10 min each. 5. Wash sections two times in dH2O for 5 min each. 6.Antigen retrieval: For Citrate: Heat slides in a microwave submersed in 1X citrate unmasking solution until boiling is initiated; continue with 10 min at a sub-boiling temperature (95°-98°C). Cool slides on bench top for 30 min. Staining 1. Wash sections in dH2O three times for 5 min each. 2. Incubate sections in 3% hydrogen peroxide for 10 min. 3. Wash sections in dH2O two times for 5 min each. 4. Wash sections in wash buffer for 5 min. 5. Block each section with 100–400 µl of blocking solution for 1 hr at room temperature. 6. Remove blocking solution and add 100–400 µl primary antibody diluent in to each section. Incubate overnight at 4°C. 7. Remove antibody solution and wash sections with wash buffer three times for 5 min each. 8. Cover section with 1–3 drops HRPas needed. Incubate in a humidified chamber for 30 min at room temperature. 9. Wash sections three times with wash buffer for 5 min each. 10. Add DAB Chromogen Concentrate to DAB Diluent and mix well before use. 11. Apply 100–400 µl DAB to each section and monitor closely. 1–10 min generally provides an acceptable staining intensity. 12. Immerse slides in dH2O. 13. If desired, counterstain sections with hematoxylin. 14. Wash sections in dH2O two times for 5 min each. 15. Dehydrate sections: Incubate sections in 95% ethanol two times for 10 sec each; Repeat in 100% ethanol, incubating sections two times for 10 sec each; Repeat in xylene, incubating sections two times for 10 sec each. 16. Mount sections with coverslips and mounting medium.

IHC

Experimental Protocol：

Deparaffinization/Rehydration

1. Deparaffinize/hydrate sections:

2. Incubate sections in three washes of xylene for 5 min each.

3. Incubate sections in two washes of 100% ethanol for 10 min each.

4. Incubate sections in two washes of 95% ethanol for 10 min each.

5. Wash sections two times in dH2O for 5 min each.

6.Antigen retrieval: For Citrate: Heat slides in a microwave submersed in 1X citrate unmasking solution until boiling is initiated; continue with 10 min at a sub-boiling temperature (95°-98°C). Cool slides on bench top for 30 min.

Staining

1. Wash sections in dH2O three times for 5 min each.

2. Incubate sections in 3% hydrogen peroxide for 10 min.

3. Wash sections in dH2O two times for 5 min each.

4. Wash sections in wash buffer for 5 min.

5. Block each section with 100–400 µl of blocking solution for 1 hr at room temperature.

6. Remove blocking solution and add 100–400 µl primary antibody diluent in to each section. Incubate overnight at 4°C.

7. Remove antibody solution and wash sections with wash buffer three times for 5 min each.

8. Cover section with 1–3 drops HRPas needed. Incubate in a humidified chamber for 30 min at room temperature.

9. Wash sections three times with wash buffer for 5 min each.

10. Add DAB Chromogen Concentrate to DAB Diluent and mix well before use.

11. Apply 100–400 µl DAB to each section and monitor closely. 1–10 min generally provides an acceptable staining intensity.

12. Immerse slides in dH2O.

13. If desired, counterstain sections with hematoxylin.

14. Wash sections in dH2O two times for 5 min each.

15. Dehydrate sections: Incubate sections in 95% ethanol two times for 10 sec each; Repeat in 100% ethanol, incubating sections two times for 10 sec each; Repeat in xylene, incubating sections two times for 10 sec each.

16. Mount sections with coverslips and mounting medium.

Datasheet & SDS

Biological Description

Specificity
α-synuclein aggregate Antibody [C4F17] detects endogenous levels of total α-synuclein aggregate protein.

Subcellular Location
Amyloid, Cell projection, Cytoplasm, Membrane, Nucleus, Secreted, Synapse

Uniprot ID
P37840

Clone
C4F17

Synonym
NACP; PARK1; SNCA; Alpha-synuclein; Non-A beta component of AD amyloid; Non-A4 component of amyloid precursor

Background
α-Synuclein aggregates constitute the defining pathological hallmark of synucleinopathies including Parkinson's disease, Dementia with Lewy Bodies, and Multiple System Atrophy, forming through conformational conversion of natively unstructured 140-amino-acid presynaptic protein α-synuclein into toxic β-sheet-rich amyloid fibrils via nucleation-dependent polymerization accelerated by Ser129 phosphorylation and oxidative stress. Native α-synuclein contains N-terminal amphipathic KTKEGV repeats enabling α-helical membrane binding and vesicle association, central NAC region's hydrophobic core driving amyloidogenic β-strand conversion, and C-terminal acidic-proline-rich domain inhibiting premature aggregation, but pathological prefibrillar oligomers acquire pore-forming properties disrupting synaptic vesicle trafficking, impairing mitochondrial complex I activity with reactive oxygen species production and calcium dysregulation, compromising lysosomal/proteasomal clearance mechanisms, and triggering chronic microglial neuroinflammation through TLR2/4 signaling pathways. Monomeric α-synuclein chaperones SNARE complex assembly optimizing dopamine neurotransmission while maintaining synaptic vesicle pools, yet soluble oligomeric intermediates rather than mature fibrils represent primary neurotoxins mediating selective nigral dopaminergic degeneration via prion-like templated misfolding propagation across neural circuits, with SNCA gene triplications and mutations (A53T, A30P, E46K) dramatically accelerating aggregation kinetics in familial cases while sporadic synucleinopathies reflect acquired proteostasis collapse.

Background

α-Synuclein aggregates constitute the defining pathological hallmark of synucleinopathies including Parkinson's disease, Dementia with Lewy Bodies, and Multiple System Atrophy, forming through conformational conversion of natively unstructured 140-amino-acid presynaptic protein α-synuclein into toxic β-sheet-rich amyloid fibrils via nucleation-dependent polymerization accelerated by Ser129 phosphorylation and oxidative stress. Native α-synuclein contains N-terminal amphipathic KTKEGV repeats enabling α-helical membrane binding and vesicle association, central NAC region's hydrophobic core driving amyloidogenic β-strand conversion, and C-terminal acidic-proline-rich domain inhibiting premature aggregation, but pathological prefibrillar oligomers acquire pore-forming properties disrupting synaptic vesicle trafficking, impairing mitochondrial complex I activity with reactive oxygen species production and calcium dysregulation, compromising lysosomal/proteasomal clearance mechanisms, and triggering chronic microglial neuroinflammation through TLR2/4 signaling pathways. Monomeric α-synuclein chaperones SNARE complex assembly optimizing dopamine neurotransmission while maintaining synaptic vesicle pools, yet soluble oligomeric intermediates rather than mature fibrils represent primary neurotoxins mediating selective nigral dopaminergic degeneration via prion-like templated misfolding propagation across neural circuits, with SNCA gene triplications and mutations (A53T, A30P, E46K) dramatically accelerating aggregation kinetics in familial cases while sporadic synucleinopathies reflect acquired proteostasis collapse.

References
https://pubmed.ncbi.nlm.nih.gov/34733860/ https://pubmed.ncbi.nlm.nih.gov/35681426/

Protein Size	PVDF Transfer Membrane Pore Size
< 10	0.22
10-20	0.22
20-30	0.45
30-45	0.45
45-70	0.45
80-100	0.45
100-140	0.45
> 140	0.45

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Protein Size	Separating Gel Percentage
4-40	20%
12-45	15%
10-70	12.5%
15-100	10%
25-100	8%
60-210	5%